Have your results emailed to you Analyses that use this web tool to interrogate large gene lists across multiple gene set databases may take several minutes. If you prefer to have the results emailed to you, instead of waiting for them, please type in your email address in the dialogue box below. GeneSetDB will then email you the results. GeneSetDB will not store your email address.

Gene/Gene Set Search

1. Query term(s) 2. Search option Exact match Phrase search Similar pattern search

3. Choose DB All SubClass Pathway SubClass Disease/Phenotype SubClass Drug/Chemical SubClass Gene Regulation SubClass Gene Ontology Biocarta EHMN HumanCyc INOH NetPath PID Reactome WikiPathways CancerGenes HPO KEGG Disease MethCancerDB MethyCancer MPO SIDER CTD DrugBank MATADOR SMPDB STITCH T3DB MicroCosm Targets miRTarBase Rel/NF-kappaB TFactS GO BP GO CC GO MF 4. Submit Sample data Gene/Gene Set Search tutorial

Enrichment Analysis

1. Gene List paste gene list Or upload gene list file

2. Input ID type Symbol Gene ID Human Gene ID Mouse Gene ID Rat Affy HG-U133 Plus2 Affy HG-U133A 2.0 Affy HG-U133A Affy HG-U133B Affy HG-U95A Affy HG-U95Av2 Affy HG Exon 1.0 ST Affy HG Gene 1.0 ST Affy MOE430A Affy MOE430B Affy MOE430 2.0 Affy MOE430A 2.0 Affy MG-U74Av2 Affy MG-U74Bv2 Affy MG-U74A Affy MG-U74B Affy MG Exon 1.0 ST Affy MG Gene 1.0 ST Affy RAE230A Affy RAE230B Affy RAE230 2.0 Affy RG-U34A Affy RG-U34B Affy Rat Tox U34 Affy RG Exon 1.0 ST Affy RG Gene 1.0 ST Agilent Hs WholeGenome Agilent Mm WholeGenome Agilent Rn WholeGenome CodeLink Hs WholeGenome CodeLink Mm WholeGenome CodeLink Rn WholeGenome Illumina Hs WG6 v1 Illumina Hs WG6 v2 Illumina Hs HT12 v3 Illumina Hs HT12 v4 Illumina Mm WG6 v1 Illumina Mm WG6 v2 Illumina Rn v1 Ensembl Gene Hs Ensembl Gene Mm Ensembl Gene Rn UniProt/SwissProt ID Hs UniProt/SwissProt ID Mm UniProt/SwissProt ID Rn 3. Choose DB All SubClass Pathway SubClass Disease/Phenotype SubClass Drug/Chemical SubClass Gene Regulation SubClass Gene Ontology Biocarta EHMN HumanCyc INOH NetPath PID Reactome WikiPathways CancerGenes HPO KEGG Disease MethCancerDB MethyCancer MPO SIDER CTD DrugBank MATADOR SMPDB STITCH T3DB MicroCosm Targets miRTarBase Rel/NF-kappaB TFactS GO BP GO CC GO MF 4. FDR 5. Submit After submit is pressed it can take a little while until the page refreshes. Sample data Enrichment Analysis tutorial

GeneSetDB is freely available for academic purposes. The users for commercial purposes should contact us (bioinformatics@auckland.ac.nz). The use of downloadable data stored in GeneSetDB is based on the terms of use of each source database.